Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.25■□□□□ 0.35
Abcf1Q6P542 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Abcf1Q6P542 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Abcf1Q6P542 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.24■□□□□ 0.35
Abcf1Q6P542 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Gm6257-201ENSMUST00000163864 910 ntBASIC17.24■□□□□ 0.35
Abcf1Q6P542 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.24■□□□□ 0.35
Abcf1Q6P542 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abcf1Q6P542 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.23■□□□□ 0.35
Abcf1Q6P542 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.23■□□□□ 0.35
Abcf1Q6P542 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.23■□□□□ 0.35
Abcf1Q6P542 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Abcf1Q6P542 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.22■□□□□ 0.35
Abcf1Q6P542 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Gm28033-201ENSMUST00000184224 96 ntBASIC17.22■□□□□ 0.35
Abcf1Q6P542 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Abcf1Q6P542 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms