Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac4Q6NZM9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac4Q6NZM9 Rps4l-201ENSMUST00000071745 943 ntBASIC17.21■□□□□ 0.35
Hdac4Q6NZM9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac4Q6NZM9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac4Q6NZM9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac4Q6NZM9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac4Q6NZM9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Hdac4Q6NZM9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
Hdac4Q6NZM9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hdac4Q6NZM9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac4Q6NZM9 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.19■□□□□ 0.34
Hdac4Q6NZM9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Gm5682-201ENSMUST00000173402 505 ntBASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Gm6376-201ENSMUST00000209407 580 ntBASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.18■□□□□ 0.34
Hdac4Q6NZM9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Gm7153-201ENSMUST00000117092 455 ntBASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac4Q6NZM9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms