Protein–RNA interactions for Protein: Q6NZK8

Ptpdc1, Protein tyrosine phosphatase domain-containing protein 1, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpdc1Q6NZK8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Gm15173-201ENSMUST00000122049 433 ntBASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Gm7230-201ENSMUST00000173026 815 ntBASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptpdc1Q6NZK8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpdc1Q6NZK8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpdc1Q6NZK8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Gm7222-201ENSMUST00000117512 906 ntBASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Gm28659-201ENSMUST00000188013 759 ntBASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ptpdc1Q6NZK8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ptpdc1Q6NZK8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ptpdc1Q6NZK8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptpdc1Q6NZK8 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.64■□□□□ 0.57
Ptpdc1Q6NZK8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ptpdc1Q6NZK8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.64■□□□□ 0.57
Ptpdc1Q6NZK8 Gm6550-201ENSMUST00000187574 993 ntBASIC18.64■□□□□ 0.57
Ptpdc1Q6NZK8 Gm37153-201ENSMUST00000193637 231 ntBASIC18.64■□□□□ 0.57
Ptpdc1Q6NZK8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ptpdc1Q6NZK8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms