Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn1Q64347 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn1Q64347 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Clcn1Q64347 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Clcn1Q64347 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Clcn1Q64347 Rprl2-201ENSMUST00000157150 290 ntBASIC19.42■□□□□ 0.7
Clcn1Q64347 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.42■□□□□ 0.7
Clcn1Q64347 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.42■□□□□ 0.7
Clcn1Q64347 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.42■□□□□ 0.7
Clcn1Q64347 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.42■□□□□ 0.7
Clcn1Q64347 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Clcn1Q64347 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.42■□□□□ 0.7
Clcn1Q64347 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.42■□□□□ 0.7
Clcn1Q64347 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.42■□□□□ 0.7
Clcn1Q64347 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn1Q64347 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Clcn1Q64347 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.41■□□□□ 0.7
Clcn1Q64347 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn1Q64347 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Clcn1Q64347 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn1Q64347 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.4■□□□□ 0.7
Clcn1Q64347 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn1Q64347 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.4■□□□□ 0.7
Clcn1Q64347 Gm12008-201ENSMUST00000117791 755 ntBASIC19.4■□□□□ 0.7
Clcn1Q64347 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.4■□□□□ 0.7
Clcn1Q64347 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn1Q64347 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.4■□□□□ 0.7
Clcn1Q64347 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clcn1Q64347 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.4■□□□□ 0.7
Clcn1Q64347 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.4■□□□□ 0.7
Clcn1Q64347 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clcn1Q64347 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.4■□□□□ 0.7
Clcn1Q64347 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn1Q64347 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn1Q64347 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Clcn1Q64347 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn1Q64347 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clcn1Q64347 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn1Q64347 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn1Q64347 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn1Q64347 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn1Q64347 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn1Q64347 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clcn1Q64347 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.39■□□□□ 0.7
Clcn1Q64347 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
Clcn1Q64347 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Gm8318-201ENSMUST00000182954 872 ntBASIC19.39■□□□□ 0.69
Clcn1Q64347 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.39■□□□□ 0.69
Clcn1Q64347 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Clcn1Q64347 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Clcn1Q64347 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms