Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.38□□□□□ -0.11
AtmQ62388 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.38□□□□□ -0.11
AtmQ62388 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.38□□□□□ -0.11
AtmQ62388 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.38□□□□□ -0.11
AtmQ62388 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.38□□□□□ -0.11
AtmQ62388 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Gm15198-201ENSMUST00000117283 177 ntBASIC14.38□□□□□ -0.11
AtmQ62388 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AtmQ62388 Gm37424-201ENSMUST00000191727 561 ntBASIC14.38□□□□□ -0.11
AtmQ62388 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtmQ62388 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
AtmQ62388 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
AtmQ62388 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.38□□□□□ -0.11
AtmQ62388 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AtmQ62388 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AtmQ62388 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.37□□□□□ -0.11
AtmQ62388 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.37□□□□□ -0.11
AtmQ62388 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.37□□□□□ -0.11
AtmQ62388 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
AtmQ62388 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AtmQ62388 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.37□□□□□ -0.11
AtmQ62388 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.37□□□□□ -0.11
AtmQ62388 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtmQ62388 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtmQ62388 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.36□□□□□ -0.11
AtmQ62388 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtmQ62388 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtmQ62388 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.36□□□□□ -0.11
AtmQ62388 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
AtmQ62388 Gm38241-201ENSMUST00000192641 898 ntBASIC14.36□□□□□ -0.11
AtmQ62388 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtmQ62388 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
AtmQ62388 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtmQ62388 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.36□□□□□ -0.11
AtmQ62388 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.36□□□□□ -0.11
AtmQ62388 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.36□□□□□ -0.11
AtmQ62388 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtmQ62388 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AtmQ62388 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AtmQ62388 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtmQ62388 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.36□□□□□ -0.11
AtmQ62388 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtmQ62388 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtmQ62388 Prob1-201ENSMUST00000097619 3021 ntBASIC14.36□□□□□ -0.11
AtmQ62388 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.35□□□□□ -0.11
AtmQ62388 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.35□□□□□ -0.11
AtmQ62388 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.35□□□□□ -0.11
AtmQ62388 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.35□□□□□ -0.11
AtmQ62388 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.35□□□□□ -0.11
AtmQ62388 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Gm5566-201ENSMUST00000116118 459 ntBASIC14.35□□□□□ -0.11
AtmQ62388 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.35□□□□□ -0.11
AtmQ62388 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
AtmQ62388 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.35□□□□□ -0.11
AtmQ62388 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
AtmQ62388 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms