Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.91■□□□□ 0.46
Scn9aQ62205 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.91■□□□□ 0.46
Scn9aQ62205 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn9aQ62205 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn9aQ62205 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.9■□□□□ 0.46
Scn9aQ62205 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.9■□□□□ 0.46
Scn9aQ62205 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn9aQ62205 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn9aQ62205 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn9aQ62205 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn9aQ62205 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Scn9aQ62205 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn9aQ62205 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn9aQ62205 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn9aQ62205 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn9aQ62205 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn9aQ62205 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Scn9aQ62205 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn9aQ62205 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn9aQ62205 Gm6745-201ENSMUST00000199216 526 ntBASIC17.9■□□□□ 0.46
Scn9aQ62205 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.9■□□□□ 0.46
Scn9aQ62205 Shd-206ENSMUST00000225145 998 ntBASIC17.9■□□□□ 0.46
Scn9aQ62205 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn9aQ62205 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.9■□□□□ 0.46
Scn9aQ62205 Gm9899-201ENSMUST00000065519 555 ntBASIC17.9■□□□□ 0.46
Scn9aQ62205 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Scn9aQ62205 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Scn9aQ62205 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.89■□□□□ 0.46
Scn9aQ62205 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Scn9aQ62205 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Scn9aQ62205 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn9aQ62205 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn9aQ62205 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn9aQ62205 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Scn9aQ62205 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn9aQ62205 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.89■□□□□ 0.45
Scn9aQ62205 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn9aQ62205 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn9aQ62205 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Scn9aQ62205 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Scn9aQ62205 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn9aQ62205 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Gm5566-201ENSMUST00000116118 459 ntBASIC17.88■□□□□ 0.45
Scn9aQ62205 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Scn9aQ62205 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.88■□□□□ 0.45
Scn9aQ62205 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Gm4875-201ENSMUST00000118257 786 ntBASIC17.88■□□□□ 0.45
Scn9aQ62205 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn9aQ62205 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn9aQ62205 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn9aQ62205 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn9aQ62205 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn9aQ62205 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn9aQ62205 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.87■□□□□ 0.45
Scn9aQ62205 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn9aQ62205 Gm6007-201ENSMUST00000208170 823 ntBASIC17.87■□□□□ 0.45
Scn9aQ62205 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.87■□□□□ 0.45
Scn9aQ62205 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn9aQ62205 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Scn9aQ62205 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn9aQ62205 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.87■□□□□ 0.45
Scn9aQ62205 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn9aQ62205 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn9aQ62205 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.86■□□□□ 0.45
Scn9aQ62205 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn9aQ62205 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Scn9aQ62205 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.86■□□□□ 0.45
Scn9aQ62205 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn9aQ62205 Gm18018-201ENSMUST00000198273 408 ntBASIC17.86■□□□□ 0.45
Scn9aQ62205 Gm18062-201ENSMUST00000208020 547 ntBASIC17.86■□□□□ 0.45
Scn9aQ62205 Gm18055-201ENSMUST00000208254 547 ntBASIC17.86■□□□□ 0.45
Scn9aQ62205 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn9aQ62205 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Scn9aQ62205 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn9aQ62205 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn9aQ62205 Gm11478-201ENSMUST00000117851 599 ntBASIC17.86■□□□□ 0.45
Scn9aQ62205 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.86■□□□□ 0.45
Scn9aQ62205 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn9aQ62205 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.86■□□□□ 0.45
Scn9aQ62205 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Scn9aQ62205 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms