Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.52■□□□□ 0.88
Gli3Q61602 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.52■□□□□ 0.88
Gli3Q61602 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gli3Q61602 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gli3Q61602 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gli3Q61602 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gli3Q61602 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gli3Q61602 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Gli3Q61602 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Gli3Q61602 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.52■□□□□ 0.88
Gli3Q61602 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Gli3Q61602 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.52■□□□□ 0.88
Gli3Q61602 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.52■□□□□ 0.88
Gli3Q61602 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.52■□□□□ 0.88
Gli3Q61602 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC20.52■□□□□ 0.88
Gli3Q61602 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gli3Q61602 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gli3Q61602 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Gli3Q61602 Gm5354-201ENSMUST00000182417 973 ntBASIC20.51■□□□□ 0.87
Gli3Q61602 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 AC165157.4-201ENSMUST00000220587 139 ntBASIC20.51■□□□□ 0.87
Gli3Q61602 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Gli3Q61602 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Gli3Q61602 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Gli3Q61602 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC20.51■□□□□ 0.87
Gli3Q61602 Mir692-1-201ENSMUST00000102263 109 ntBASIC20.51■□□□□ 0.87
Gli3Q61602 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.51■□□□□ 0.87
Gli3Q61602 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gli3Q61602 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC20.5■□□□□ 0.87
Gli3Q61602 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 Gm5479-201ENSMUST00000160578 435 ntBASIC20.5■□□□□ 0.87
Gli3Q61602 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gli3Q61602 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Gli3Q61602 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gli3Q61602 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gli3Q61602 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Gli3Q61602 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gli3Q61602 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gli3Q61602 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gli3Q61602 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gli3Q61602 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Gli3Q61602 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gli3Q61602 Gm14723-201ENSMUST00000118686 215 ntBASIC20.49■□□□□ 0.87
Gli3Q61602 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gli3Q61602 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC20.49■□□□□ 0.87
Gli3Q61602 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gli3Q61602 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gli3Q61602 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gli3Q61602 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Gli3Q61602 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gli3Q61602 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gli3Q61602 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gli3Q61602 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gli3Q61602 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC20.48■□□□□ 0.87
Gli3Q61602 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gli3Q61602 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC20.48■□□□□ 0.87
Gli3Q61602 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gli3Q61602 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gli3Q61602 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gli3Q61602 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gli3Q61602 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Gli3Q61602 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC20.48■□□□□ 0.87
Gli3Q61602 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gli3Q61602 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.47■□□□□ 0.87
Gli3Q61602 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC20.47■□□□□ 0.87
Gli3Q61602 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Gli3Q61602 Gm27572-201ENSMUST00000183702 255 ntBASIC20.47■□□□□ 0.87
Gli3Q61602 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC20.47■□□□□ 0.87
Gli3Q61602 Gm45453-201ENSMUST00000211758 853 ntBASIC20.47■□□□□ 0.87
Gli3Q61602 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC20.47■□□□□ 0.87
Gli3Q61602 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gli3Q61602 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gli3Q61602 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gli3Q61602 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.47■□□□□ 0.87
Gli3Q61602 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms