Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Irf9Q61179 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
Irf9Q61179 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Irf9Q61179 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Mir1895-201ENSMUST00000122615 79 ntBASIC19.07■□□□□ 0.64
Irf9Q61179 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.07■□□□□ 0.64
Irf9Q61179 Gm11025-201ENSMUST00000140773 466 ntBASIC19.07■□□□□ 0.64
Irf9Q61179 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Irf9Q61179 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.07■□□□□ 0.64
Irf9Q61179 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Irf9Q61179 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Irf9Q61179 Prob1-201ENSMUST00000097619 3021 ntBASIC19.07■□□□□ 0.64
Irf9Q61179 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Irf9Q61179 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.06■□□□□ 0.64
Irf9Q61179 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf9Q61179 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Irf9Q61179 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.06■□□□□ 0.64
Irf9Q61179 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf9Q61179 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf9Q61179 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf9Q61179 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.06■□□□□ 0.64
Irf9Q61179 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.06■□□□□ 0.64
Irf9Q61179 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.06■□□□□ 0.64
Irf9Q61179 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.06■□□□□ 0.64
Irf9Q61179 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf9Q61179 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf9Q61179 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf9Q61179 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.06■□□□□ 0.64
Irf9Q61179 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf9Q61179 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Irf9Q61179 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Irf9Q61179 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Irf9Q61179 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Irf9Q61179 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Irf9Q61179 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Irf9Q61179 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.05■□□□□ 0.64
Irf9Q61179 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.05■□□□□ 0.64
Irf9Q61179 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.05■□□□□ 0.64
Irf9Q61179 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Gm25925-201ENSMUST00000158314 306 ntBASIC19.05■□□□□ 0.64
Irf9Q61179 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Irf9Q61179 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.05■□□□□ 0.64
Irf9Q61179 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.05■□□□□ 0.64
Irf9Q61179 Gm10154-201ENSMUST00000084445 354 ntBASIC19.05■□□□□ 0.64
Irf9Q61179 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Irf9Q61179 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf9Q61179 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf9Q61179 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf9Q61179 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Irf9Q61179 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf9Q61179 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Irf9Q61179 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf9Q61179 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.04■□□□□ 0.64
Irf9Q61179 Gm13365-201ENSMUST00000121188 973 ntBASIC19.04■□□□□ 0.64
Irf9Q61179 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf9Q61179 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf9Q61179 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Irf9Q61179 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf9Q61179 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.04■□□□□ 0.64
Irf9Q61179 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.04■□□□□ 0.64
Irf9Q61179 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf9Q61179 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.04■□□□□ 0.64
Irf9Q61179 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf9Q61179 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf9Q61179 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.03■□□□□ 0.64
Irf9Q61179 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Irf9Q61179 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Irf9Q61179 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.03■□□□□ 0.64
Irf9Q61179 Gm11745-201ENSMUST00000121669 448 ntBASIC19.03■□□□□ 0.64
Irf9Q61179 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.03■□□□□ 0.64
Irf9Q61179 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Irf9Q61179 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Irf9Q61179 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms