Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Foxd3Q61060 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Foxd3Q61060 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.13□□□□□ -0.15
Foxd3Q61060 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.13□□□□□ -0.15
Foxd3Q61060 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd3Q61060 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.12□□□□□ -0.15
Foxd3Q61060 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Foxd3Q61060 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Foxd3Q61060 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Foxd3Q61060 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Foxd3Q61060 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.12□□□□□ -0.15
Foxd3Q61060 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.12□□□□□ -0.15
Foxd3Q61060 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.12□□□□□ -0.15
Foxd3Q61060 Mir8098-201ENSMUST00000184011 137 ntBASIC14.12□□□□□ -0.15
Foxd3Q61060 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Foxd3Q61060 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Foxd3Q61060 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxd3Q61060 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Foxd3Q61060 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxd3Q61060 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Foxd3Q61060 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Foxd3Q61060 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Foxd3Q61060 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxd3Q61060 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Foxd3Q61060 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Foxd3Q61060 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Foxd3Q61060 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.11□□□□□ -0.15
Foxd3Q61060 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.11□□□□□ -0.15
Foxd3Q61060 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.11□□□□□ -0.15
Foxd3Q61060 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxd3Q61060 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Foxd3Q61060 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxd3Q61060 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxd3Q61060 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Foxd3Q61060 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxd3Q61060 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Foxd3Q61060 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxd3Q61060 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Gm12895-201ENSMUST00000122214 226 ntBASIC14.1□□□□□ -0.15
Foxd3Q61060 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.1□□□□□ -0.15
Foxd3Q61060 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.1□□□□□ -0.15
Foxd3Q61060 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.1□□□□□ -0.15
Foxd3Q61060 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Foxd3Q61060 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Foxd3Q61060 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms