Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.25■□□□□ 0.03
Sim1Q61045 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.25■□□□□ 0.03
Sim1Q61045 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sim1Q61045 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.25■□□□□ 0.03
Sim1Q61045 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sim1Q61045 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.25■□□□□ 0.03
Sim1Q61045 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.25■□□□□ 0.03
Sim1Q61045 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sim1Q61045 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sim1Q61045 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sim1Q61045 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sim1Q61045 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.24■□□□□ 0.03
Sim1Q61045 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.24■□□□□ 0.03
Sim1Q61045 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sim1Q61045 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
Sim1Q61045 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Sim1Q61045 Gm27646-201ENSMUST00000183989 110 ntBASIC15.23■□□□□ 0.03
Sim1Q61045 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.23■□□□□ 0.03
Sim1Q61045 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.23■□□□□ 0.03
Sim1Q61045 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.23■□□□□ 0.03
Sim1Q61045 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Sim1Q61045 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Sim1Q61045 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sim1Q61045 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sim1Q61045 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.22■□□□□ 0.03
Sim1Q61045 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.22■□□□□ 0.03
Sim1Q61045 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.22■□□□□ 0.03
Sim1Q61045 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sim1Q61045 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.21■□□□□ 0.03
Sim1Q61045 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.21■□□□□ 0.03
Sim1Q61045 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sim1Q61045 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sim1Q61045 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sim1Q61045 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sim1Q61045 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sim1Q61045 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sim1Q61045 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sim1Q61045 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.21■□□□□ 0.03
Sim1Q61045 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sim1Q61045 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.21■□□□□ 0.03
Sim1Q61045 Gm5682-201ENSMUST00000173402 505 ntBASIC15.21■□□□□ 0.03
Sim1Q61045 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.21■□□□□ 0.03
Sim1Q61045 Gm18622-201ENSMUST00000219361 595 ntBASIC15.21■□□□□ 0.03
Sim1Q61045 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.21■□□□□ 0.03
Sim1Q61045 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sim1Q61045 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sim1Q61045 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Sim1Q61045 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sim1Q61045 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sim1Q61045 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms