Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Col12a1Q60847 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col12a1Q60847 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col12a1Q60847 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col12a1Q60847 Gm3786-201ENSMUST00000202659 378 ntBASIC15.01□□□□□ -0.01
Col12a1Q60847 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.01□□□□□ -0.01
Col12a1Q60847 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Col12a1Q60847 Gm8062-201ENSMUST00000139696 444 ntBASIC15.01□□□□□ -0.01
Col12a1Q60847 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
Col12a1Q60847 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.01□□□□□ -0.01
Col12a1Q60847 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col12a1Q60847 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col12a1Q60847 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Gm24543-201ENSMUST00000103867 82 ntBASIC15.01□□□□□ -0.01
Col12a1Q60847 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.01□□□□□ -0.01
Col12a1Q60847 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Col12a1Q60847 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col12a1Q60847 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col12a1Q60847 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15□□□□□ -0.01
Col12a1Q60847 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col12a1Q60847 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15□□□□□ -0.01
Col12a1Q60847 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Col12a1Q60847 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15□□□□□ -0.01
Col12a1Q60847 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col12a1Q60847 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15□□□□□ -0.01
Col12a1Q60847 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15□□□□□ -0.01
Col12a1Q60847 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Gm15823-201ENSMUST00000064305 670 ntBASIC15□□□□□ -0.01
Col12a1Q60847 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Col12a1Q60847 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col12a1Q60847 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Gm12742-201ENSMUST00000117326 410 ntBASIC14.99□□□□□ -0.01
Col12a1Q60847 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Col12a1Q60847 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Col12a1Q60847 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Col12a1Q60847 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.99□□□□□ -0.01
Col12a1Q60847 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.99□□□□□ -0.01
Col12a1Q60847 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col12a1Q60847 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.99□□□□□ -0.01
Col12a1Q60847 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.99□□□□□ -0.01
Col12a1Q60847 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.99□□□□□ -0.01
Col12a1Q60847 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col12a1Q60847 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.98□□□□□ -0.01
Col12a1Q60847 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.98□□□□□ -0.01
Col12a1Q60847 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.98□□□□□ -0.01
Col12a1Q60847 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.98□□□□□ -0.01
Col12a1Q60847 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.98□□□□□ -0.01
Col12a1Q60847 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.98□□□□□ -0.01
Col12a1Q60847 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms