Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shroom1Q5SX79 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Chchd1-203ENSMUST00000224633 557 ntBASIC16.35■□□□□ 0.21
Shroom1Q5SX79 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shroom1Q5SX79 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.34■□□□□ 0.21
Shroom1Q5SX79 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shroom1Q5SX79 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Shroom1Q5SX79 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shroom1Q5SX79 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shroom1Q5SX79 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shroom1Q5SX79 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shroom1Q5SX79 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Shroom1Q5SX79 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shroom1Q5SX79 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.33■□□□□ 0.21
Shroom1Q5SX79 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms