Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Gm11594-201ENSMUST00000122313 162 ntBASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav2Q5R1I9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav2Q5R1I9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav2Q5R1I9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav2Q5R1I9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav2Q5R1I9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav2Q5R1I9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms