Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-1Q5R1I8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-1Q5R1I8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Trav3-1Q5R1I8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.4□□□□□ -0.75
Trav3-1Q5R1I8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-1Q5R1I8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-1Q5R1I8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-1Q5R1I8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-1Q5R1I8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Trav3-1Q5R1I8 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-1Q5R1I8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Nsd1-203ENSMUST00000224156 1149 ntBASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms