Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Scarf1Q5ND28 BC037039-201ENSMUST00000192003 2205 ntBASIC16.83■□□□□ 0.28
Scarf1Q5ND28 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC16.83■□□□□ 0.28
Scarf1Q5ND28 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.83■□□□□ 0.28
Scarf1Q5ND28 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scarf1Q5ND28 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scarf1Q5ND28 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Scarf1Q5ND28 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scarf1Q5ND28 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scarf1Q5ND28 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarf1Q5ND28 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Gm11779-201ENSMUST00000118541 368 ntBASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Gm18246-201ENSMUST00000221023 728 ntBASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Asic1-205ENSMUST00000228185 1818 ntBASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scarf1Q5ND28 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Gm9727-201ENSMUST00000161387 555 ntBASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Gm38116-201ENSMUST00000193873 1533 ntBASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Scarf1Q5ND28 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scarf1Q5ND28 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms