Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Shank3Q4ACU6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Shank3Q4ACU6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Shank3Q4ACU6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.91■□□□□ 0.62
Shank3Q4ACU6 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.91■□□□□ 0.62
Shank3Q4ACU6 Gm5479-201ENSMUST00000160578 435 ntBASIC18.91■□□□□ 0.62
Shank3Q4ACU6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Shank3Q4ACU6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shank3Q4ACU6 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.91■□□□□ 0.62
Shank3Q4ACU6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shank3Q4ACU6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shank3Q4ACU6 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.91■□□□□ 0.62
Shank3Q4ACU6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank3Q4ACU6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Shank3Q4ACU6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Shank3Q4ACU6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Shank3Q4ACU6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Mir6420-201ENSMUST00000185032 102 ntBASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Celf4-206ENSMUST00000224553 1729 ntBASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Shank3Q4ACU6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Gm3436-201ENSMUST00000179930 840 ntBASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Mir7085-201ENSMUST00000184353 66 ntBASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Gm44719-201ENSMUST00000206404 149 ntBASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Gm9899-201ENSMUST00000065519 555 ntBASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Shank3Q4ACU6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Gm16476-201ENSMUST00000221544 139 ntBASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank3Q4ACU6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms