Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Gm24158-201ENSMUST00000175263 71 ntBASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Upf3aQ3ULJ3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Gm6973-201ENSMUST00000117080 721 ntBASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upf3aQ3ULJ3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upf3aQ3ULJ3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Upf3aQ3ULJ3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Upf3aQ3ULJ3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upf3aQ3ULJ3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms