Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b2Q3UJB0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Gm6263-201ENSMUST00000120029 1342 ntBASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Gm6266-201ENSMUST00000203844 806 ntBASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b2Q3UJB0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.77■□□□□ 0.75
Sf3b2Q3UJB0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Gm14722-201ENSMUST00000118943 689 ntBASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.76■□□□□ 0.75
Sf3b2Q3UJB0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Gm24543-201ENSMUST00000103867 82 ntBASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Gm14042-201ENSMUST00000120139 833 ntBASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Gm5320-201ENSMUST00000207163 1519 ntBASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b2Q3UJB0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Gm20445-201ENSMUST00000061905 565 ntBASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms