Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Gm11950-201ENSMUST00000121615 838 ntBASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Gm6345-202ENSMUST00000180900 204 ntBASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Gm29518-201ENSMUST00000190858 372 ntBASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Gm17808-201ENSMUST00000200859 894 ntBASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fndc4Q3TR08 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.15□□□□□ -0.3
Fndc4Q3TR08 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fndc4Q3TR08 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Fndc4Q3TR08 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Fndc4Q3TR08 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Fndc4Q3TR08 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fndc4Q3TR08 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms