Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Gm7553-201ENSMUST00000185805 1426 ntBASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Gm42997-202ENSMUST00000200321 985 ntBASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Gm6082-201ENSMUST00000215204 454 ntBASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Gm2383-201ENSMUST00000181461 807 ntBASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Gm27486-201ENSMUST00000184923 80 ntBASIC8.06□□□□□ -1.12
Ush2AQ2QI47 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Mir7654-201ENSMUST00000185082 70 ntBASIC8.06□□□□□ -1.12
Ush2AQ2QI47 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Proscos-202ENSMUST00000178990 666 ntBASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ush2AQ2QI47 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Gm42442-201ENSMUST00000197951 1133 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Gm8959-201ENSMUST00000213150 571 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Gm24196-201ENSMUST00000179161 110 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms