Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ptchd3Q0EEE2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Gm25016-201ENSMUST00000158399 131 ntBASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Gm17808-201ENSMUST00000200859 894 ntBASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ptchd3Q0EEE2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Gm11950-201ENSMUST00000121615 838 ntBASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Gm10052-201ENSMUST00000168019 960 ntBASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Gm7729-201ENSMUST00000050143 801 ntBASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms