Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tff1Q08423 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.81□□□□□ -0.36
Tff1Q08423 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tff1Q08423 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.81□□□□□ -0.36
Tff1Q08423 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Gm18733-201ENSMUST00000173950 856 ntBASIC12.81□□□□□ -0.36
Tff1Q08423 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tff1Q08423 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 BC037039-201ENSMUST00000192003 2205 ntBASIC12.81□□□□□ -0.36
Tff1Q08423 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tff1Q08423 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tff1Q08423 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.81□□□□□ -0.36
Tff1Q08423 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tff1Q08423 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.8□□□□□ -0.36
Tff1Q08423 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tff1Q08423 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tff1Q08423 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Tff1Q08423 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tff1Q08423 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.8□□□□□ -0.36
Tff1Q08423 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tff1Q08423 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Tff1Q08423 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tff1Q08423 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tff1Q08423 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tff1Q08423 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.79□□□□□ -0.36
Tff1Q08423 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tff1Q08423 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Tff1Q08423 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tff1Q08423 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Tff1Q08423 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Tff1Q08423 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.79□□□□□ -0.36
Tff1Q08423 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.79□□□□□ -0.36
Tff1Q08423 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.79□□□□□ -0.36
Tff1Q08423 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.79□□□□□ -0.36
Tff1Q08423 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms