Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col17a1Q07563 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col17a1Q07563 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col17a1Q07563 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Col17a1Q07563 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC23.38■■□□□ 1.33
Col17a1Q07563 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Col17a1Q07563 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Col17a1Q07563 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Col17a1Q07563 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Col17a1Q07563 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col17a1Q07563 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col17a1Q07563 Gm43289-201ENSMUST00000200537 1475 ntBASIC23.38■■□□□ 1.33
Col17a1Q07563 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col17a1Q07563 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Col17a1Q07563 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Col17a1Q07563 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col17a1Q07563 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.38■■□□□ 1.33
Col17a1Q07563 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC23.37■■□□□ 1.33
Col17a1Q07563 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col17a1Q07563 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC23.37■■□□□ 1.33
Col17a1Q07563 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col17a1Q07563 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Col17a1Q07563 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Col17a1Q07563 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Col17a1Q07563 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col17a1Q07563 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Col17a1Q07563 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col17a1Q07563 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC23.36■■□□□ 1.33
Col17a1Q07563 Gm27516-201ENSMUST00000184237 98 ntBASIC23.36■■□□□ 1.33
Col17a1Q07563 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC23.36■■□□□ 1.33
Col17a1Q07563 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC23.36■■□□□ 1.33
Col17a1Q07563 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC23.36■■□□□ 1.33
Col17a1Q07563 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col17a1Q07563 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col17a1Q07563 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col17a1Q07563 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
Col17a1Q07563 Gm37519-201ENSMUST00000191687 2210 ntBASIC23.36■■□□□ 1.33
Col17a1Q07563 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col17a1Q07563 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col17a1Q07563 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC23.36■■□□□ 1.33
Col17a1Q07563 Gm6756-201ENSMUST00000180647 1620 ntBASIC23.36■■□□□ 1.33
Col17a1Q07563 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC23.36■■□□□ 1.33
Col17a1Q07563 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col17a1Q07563 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC23.36■■□□□ 1.33
Col17a1Q07563 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC23.36■■□□□ 1.33
Col17a1Q07563 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col17a1Q07563 Gm8969-201ENSMUST00000199694 526 ntBASIC23.36■■□□□ 1.33
Col17a1Q07563 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col17a1Q07563 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col17a1Q07563 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col17a1Q07563 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Col17a1Q07563 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Col17a1Q07563 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Col17a1Q07563 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Col17a1Q07563 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC23.35■■□□□ 1.33
Col17a1Q07563 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC23.35■■□□□ 1.33
Col17a1Q07563 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC23.35■■□□□ 1.33
Col17a1Q07563 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col17a1Q07563 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col17a1Q07563 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col17a1Q07563 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col17a1Q07563 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Col17a1Q07563 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC23.34■■□□□ 1.33
Col17a1Q07563 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col17a1Q07563 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col17a1Q07563 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col17a1Q07563 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Col17a1Q07563 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col17a1Q07563 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col17a1Q07563 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col17a1Q07563 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col17a1Q07563 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col17a1Q07563 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC23.34■■□□□ 1.33
Col17a1Q07563 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col17a1Q07563 Gm18307-201ENSMUST00000206864 949 ntBASIC23.34■■□□□ 1.33
Col17a1Q07563 CT010506.4-201ENSMUST00000225457 351 ntBASIC23.34■■□□□ 1.33
Col17a1Q07563 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Col17a1Q07563 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Col17a1Q07563 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC23.34■■□□□ 1.33
Col17a1Q07563 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC23.34■■□□□ 1.33
Col17a1Q07563 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col17a1Q07563 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col17a1Q07563 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col17a1Q07563 Zcchc6-207ENSMUST00000225576 2499 ntBASIC23.33■■□□□ 1.33
Col17a1Q07563 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col17a1Q07563 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC23.33■■□□□ 1.33
Col17a1Q07563 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col17a1Q07563 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col17a1Q07563 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
Col17a1Q07563 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC23.33■■□□□ 1.33
Col17a1Q07563 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC23.33■■□□□ 1.33
Col17a1Q07563 Gm43118-201ENSMUST00000199149 775 ntBASIC23.33■■□□□ 1.33
Col17a1Q07563 AC149588.3-201ENSMUST00000227515 150 ntBASIC23.33■■□□□ 1.33
Col17a1Q07563 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col17a1Q07563 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col17a1Q07563 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC23.33■■□□□ 1.33
Col17a1Q07563 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Col17a1Q07563 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Col17a1Q07563 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Col17a1Q07563 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms