Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col9a1Q05722 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col9a1Q05722 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col9a1Q05722 Gm25509-201ENSMUST00000116985 106 ntBASIC15.03■□□□□ -0
Col9a1Q05722 Gm14723-201ENSMUST00000118686 215 ntBASIC15.03■□□□□ -0
Col9a1Q05722 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col9a1Q05722 Gm27341-201ENSMUST00000183570 106 ntBASIC15.03■□□□□ -0
Col9a1Q05722 Gm27501-201ENSMUST00000183599 107 ntBASIC15.03■□□□□ -0
Col9a1Q05722 Gm43037-201ENSMUST00000196808 250 ntBASIC15.03■□□□□ -0
Col9a1Q05722 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.03■□□□□ -0
Col9a1Q05722 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col9a1Q05722 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col9a1Q05722 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col9a1Q05722 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col9a1Q05722 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col9a1Q05722 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col9a1Q05722 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Col9a1Q05722 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col9a1Q05722 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col9a1Q05722 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col9a1Q05722 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col9a1Q05722 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col9a1Q05722 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Col9a1Q05722 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.02■□□□□ -0
Col9a1Q05722 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.02■□□□□ -0
Col9a1Q05722 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.02■□□□□ -0
Col9a1Q05722 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.02■□□□□ -0
Col9a1Q05722 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.02■□□□□ -0
Col9a1Q05722 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.02■□□□□ -0
Col9a1Q05722 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col9a1Q05722 Nsd1-205ENSMUST00000224693 852 ntBASIC15.02■□□□□ -0
Col9a1Q05722 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.02□□□□□ -0.01
Col9a1Q05722 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col9a1Q05722 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.02□□□□□ -0.01
Col9a1Q05722 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.02□□□□□ -0.01
Col9a1Q05722 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col9a1Q05722 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col9a1Q05722 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Col9a1Q05722 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.02□□□□□ -0.01
Col9a1Q05722 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col9a1Q05722 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col9a1Q05722 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.01□□□□□ -0.01
Col9a1Q05722 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col9a1Q05722 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.01□□□□□ -0.01
Col9a1Q05722 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC15.01□□□□□ -0.01
Col9a1Q05722 Gm43138-201ENSMUST00000199123 708 ntBASIC15.01□□□□□ -0.01
Col9a1Q05722 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Gm18377-201ENSMUST00000215141 607 ntBASIC15.01□□□□□ -0.01
Col9a1Q05722 Gm45925-201ENSMUST00000218882 744 ntBASIC15.01□□□□□ -0.01
Col9a1Q05722 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.01□□□□□ -0.01
Col9a1Q05722 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col9a1Q05722 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col9a1Q05722 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col9a1Q05722 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col9a1Q05722 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col9a1Q05722 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col9a1Q05722 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col9a1Q05722 Gm4875-201ENSMUST00000118257 786 ntBASIC15□□□□□ -0.01
Col9a1Q05722 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC15□□□□□ -0.01
Col9a1Q05722 Gm8801-201ENSMUST00000173255 1064 ntBASIC15□□□□□ -0.01
Col9a1Q05722 Gm27839-201ENSMUST00000184242 106 ntBASIC15□□□□□ -0.01
Col9a1Q05722 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15□□□□□ -0.01
Col9a1Q05722 Gm43974-201ENSMUST00000205080 684 ntBASIC15□□□□□ -0.01
Col9a1Q05722 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15□□□□□ -0.01
Col9a1Q05722 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col9a1Q05722 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col9a1Q05722 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col9a1Q05722 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col9a1Q05722 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col9a1Q05722 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms