Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm22065-201ENSMUST00000103753 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm22066-201ENSMUST00000103761 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm24932-201ENSMUST00000103763 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm24115-201ENSMUST00000103799 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm22190-201ENSMUST00000103827 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm22191-201ENSMUST00000103831 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm24721-201ENSMUST00000103849 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm28018-201ENSMUST00000103869 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm26399-201ENSMUST00000103937 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.97■□□□□ 0.31
Col6a1Q04857 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm25349-201ENSMUST00000177728 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm23616-201ENSMUST00000177797 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm25871-201ENSMUST00000177816 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm24752-201ENSMUST00000178240 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm24496-201ENSMUST00000178287 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm25649-201ENSMUST00000178476 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm25548-201ENSMUST00000178681 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm23147-201ENSMUST00000178841 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm26095-201ENSMUST00000179270 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm22171-201ENSMUST00000179283 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm23936-201ENSMUST00000179354 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm22619-201ENSMUST00000179516 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm25255-201ENSMUST00000179579 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm24755-201ENSMUST00000179691 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm26506-201ENSMUST00000179692 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm25086-201ENSMUST00000179931 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm23243-201ENSMUST00000180047 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm24659-201ENSMUST00000180212 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm24169-201ENSMUST00000180244 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm23689-201ENSMUST00000180354 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm27359-201ENSMUST00000184153 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm27785-201ENSMUST00000184268 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm27466-201ENSMUST00000184396 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm27430-201ENSMUST00000184585 107 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm27703-201ENSMUST00000184836 110 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm44333-201ENSMUST00000197168 107 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Thap2-203ENSMUST00000218989 527 ntBASIC16.97■□□□□ 0.31
Col6a1Q04857 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.97■□□□□ 0.31
Col6a1Q04857 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.97■□□□□ 0.31
Col6a1Q04857 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.97■□□□□ 0.31
Col6a1Q04857 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a1Q04857 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Col6a1Q04857 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Col6a1Q04857 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Col6a1Q04857 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.96■□□□□ 0.31
Col6a1Q04857 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.96■□□□□ 0.31
Col6a1Q04857 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
Col6a1Q04857 Gm5866-201ENSMUST00000177881 973 ntBASIC16.96■□□□□ 0.31
Col6a1Q04857 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Gm7774-201ENSMUST00000200064 533 ntBASIC16.96■□□□□ 0.31
Col6a1Q04857 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col6a1Q04857 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col6a1Q04857 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col6a1Q04857 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a1Q04857 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Col6a1Q04857 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col6a1Q04857 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col6a1Q04857 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col6a1Q04857 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col6a1Q04857 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Col6a1Q04857 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a1Q04857 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a1Q04857 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.95■□□□□ 0.3
Col6a1Q04857 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a1Q04857 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a1Q04857 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.95■□□□□ 0.3
Col6a1Q04857 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a1Q04857 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col6a1Q04857 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col6a1Q04857 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.95■□□□□ 0.3
Col6a1Q04857 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms