Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Gm12428-201ENSMUST00000119844 727 ntBASIC19.23■□□□□ 0.67
Nkx2-3P97334 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.23■□□□□ 0.67
Nkx2-3P97334 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Gm27920-201ENSMUST00000183953 96 ntBASIC19.23■□□□□ 0.67
Nkx2-3P97334 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-3P97334 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Gm27430-201ENSMUST00000184585 107 ntBASIC19.22■□□□□ 0.67
Nkx2-3P97334 Gm44333-201ENSMUST00000197168 107 ntBASIC19.22■□□□□ 0.67
Nkx2-3P97334 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-3P97334 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Nkx2-3P97334 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Nkx2-3P97334 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Nkx2-3P97334 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-3P97334 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Nkx2-3P97334 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Gm18766-201ENSMUST00000189811 808 ntBASIC19.2■□□□□ 0.66
Nkx2-3P97334 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.2■□□□□ 0.66
Nkx2-3P97334 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.2■□□□□ 0.66
Nkx2-3P97334 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms