Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
PrkdcP97313 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
PrkdcP97313 Gm6091-201ENSMUST00000098307 165 ntBASIC10.38□□□□□ -0.75
PrkdcP97313 Gm37811-201ENSMUST00000192416 2601 ntBASIC10.38□□□□□ -0.75
PrkdcP97313 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.38□□□□□ -0.75
PrkdcP97313 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Gm5187-201ENSMUST00000117317 991 ntBASIC10.38□□□□□ -0.75
PrkdcP97313 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Gm27731-201ENSMUST00000185192 107 ntBASIC10.38□□□□□ -0.75
PrkdcP97313 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.38□□□□□ -0.75
PrkdcP97313 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.38□□□□□ -0.75
PrkdcP97313 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
PrkdcP97313 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Gm27631-201ENSMUST00000184163 466 ntBASIC10.38□□□□□ -0.75
PrkdcP97313 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10.38□□□□□ -0.75
PrkdcP97313 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
PrkdcP97313 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
PrkdcP97313 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PrkdcP97313 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
PrkdcP97313 AC164565.1-201ENSMUST00000217520 1484 ntBASIC10.37□□□□□ -0.75
PrkdcP97313 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 AC069562.2-201ENSMUST00000224644 2146 ntBASIC10.37□□□□□ -0.75
PrkdcP97313 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
PrkdcP97313 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.37□□□□□ -0.75
PrkdcP97313 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC10.37□□□□□ -0.75
PrkdcP97313 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
PrkdcP97313 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.37□□□□□ -0.75
PrkdcP97313 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
PrkdcP97313 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
PrkdcP97313 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
PrkdcP97313 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 AA619741-201ENSMUST00000195095 646 ntBASIC10.37□□□□□ -0.75
PrkdcP97313 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
PrkdcP97313 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
PrkdcP97313 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
PrkdcP97313 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.37□□□□□ -0.75
PrkdcP97313 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PrkdcP97313 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
PrkdcP97313 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Gm7584-201ENSMUST00000175829 940 ntBASIC10.36□□□□□ -0.75
PrkdcP97313 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.36□□□□□ -0.75
PrkdcP97313 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.36□□□□□ -0.75
PrkdcP97313 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.36□□□□□ -0.75
PrkdcP97313 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.36□□□□□ -0.75
PrkdcP97313 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
PrkdcP97313 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC10.36□□□□□ -0.75
PrkdcP97313 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.36□□□□□ -0.75
PrkdcP97313 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.36□□□□□ -0.75
PrkdcP97313 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.36□□□□□ -0.75
PrkdcP97313 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
PrkdcP97313 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC10.36□□□□□ -0.75
PrkdcP97313 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
PrkdcP97313 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.36□□□□□ -0.75
PrkdcP97313 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PrkdcP97313 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
PrkdcP97313 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.35□□□□□ -0.75
PrkdcP97313 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.35□□□□□ -0.75
PrkdcP97313 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
PrkdcP97313 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms