Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SgcaP82350 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SgcaP82350 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SgcaP82350 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.92□□□□□ -0.34
SgcaP82350 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.92□□□□□ -0.34
SgcaP82350 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SgcaP82350 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SgcaP82350 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.91□□□□□ -0.34
SgcaP82350 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.91□□□□□ -0.34
SgcaP82350 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SgcaP82350 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.91□□□□□ -0.34
SgcaP82350 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.91□□□□□ -0.34
SgcaP82350 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.91□□□□□ -0.34
SgcaP82350 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
SgcaP82350 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SgcaP82350 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.91□□□□□ -0.34
SgcaP82350 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.91□□□□□ -0.34
SgcaP82350 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SgcaP82350 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SgcaP82350 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.91□□□□□ -0.34
SgcaP82350 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.91□□□□□ -0.34
SgcaP82350 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SgcaP82350 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.91□□□□□ -0.34
SgcaP82350 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcaP82350 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SgcaP82350 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SgcaP82350 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.9□□□□□ -0.34
SgcaP82350 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SgcaP82350 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.9□□□□□ -0.34
SgcaP82350 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.9□□□□□ -0.34
SgcaP82350 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SgcaP82350 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.9□□□□□ -0.34
SgcaP82350 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.9□□□□□ -0.34
SgcaP82350 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.9□□□□□ -0.34
SgcaP82350 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.9□□□□□ -0.34
SgcaP82350 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SgcaP82350 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcaP82350 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
SgcaP82350 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SgcaP82350 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SgcaP82350 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.89□□□□□ -0.35
SgcaP82350 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.89□□□□□ -0.35
SgcaP82350 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.89□□□□□ -0.35
SgcaP82350 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Gm13168-201ENSMUST00000121771 632 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms