Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Lhx1P63006 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lhx1P63006 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.09■□□□□ 0.01
Lhx1P63006 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.09■□□□□ 0.01
Lhx1P63006 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.09■□□□□ 0.01
Lhx1P63006 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lhx1P63006 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Lhx1P63006 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.09■□□□□ 0.01
Lhx1P63006 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx1P63006 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Lhx1P63006 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Lhx1P63006 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lhx1P63006 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lhx1P63006 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lhx1P63006 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Lhx1P63006 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Lhx1P63006 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx1P63006 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx1P63006 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx1P63006 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.08■□□□□ 0
Lhx1P63006 Gm11594-201ENSMUST00000122313 162 ntBASIC15.08■□□□□ 0
Lhx1P63006 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.08■□□□□ 0
Lhx1P63006 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lhx1P63006 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.08■□□□□ 0
Lhx1P63006 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx1P63006 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx1P63006 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx1P63006 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx1P63006 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx1P63006 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx1P63006 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx1P63006 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Lhx1P63006 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx1P63006 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.08■□□□□ 0
Lhx1P63006 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lhx1P63006 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.07■□□□□ 0
Lhx1P63006 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.07■□□□□ 0
Lhx1P63006 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Lhx1P63006 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.07■□□□□ 0
Lhx1P63006 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.07■□□□□ 0
Lhx1P63006 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.07■□□□□ 0
Lhx1P63006 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.07■□□□□ 0
Lhx1P63006 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lhx1P63006 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.07■□□□□ 0
Lhx1P63006 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lhx1P63006 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lhx1P63006 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lhx1P63006 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx1P63006 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lhx1P63006 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.06■□□□□ 0
Lhx1P63006 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.06■□□□□ 0
Lhx1P63006 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.06■□□□□ 0
Lhx1P63006 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Lhx1P63006 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Lhx1P63006 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.06■□□□□ 0
Lhx1P63006 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.06■□□□□ 0
Lhx1P63006 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Lhx1P63006 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms