Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfn1P62962 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pfn1P62962 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pfn1P62962 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.97□□□□□ -0.49
Pfn1P62962 Gm3375-201ENSMUST00000203929 796 ntBASIC11.97□□□□□ -0.49
Pfn1P62962 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pfn1P62962 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfn1P62962 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Pfn1P62962 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfn1P62962 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Pfn1P62962 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfn1P62962 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfn1P62962 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pfn1P62962 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.97□□□□□ -0.49
Pfn1P62962 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfn1P62962 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfn1P62962 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfn1P62962 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pfn1P62962 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pfn1P62962 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pfn1P62962 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Pfn1P62962 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.96□□□□□ -0.49
Pfn1P62962 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pfn1P62962 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.96□□□□□ -0.49
Pfn1P62962 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
Pfn1P62962 Gm11539-201ENSMUST00000119837 557 ntBASIC11.96□□□□□ -0.49
Pfn1P62962 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.96□□□□□ -0.49
Pfn1P62962 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.96□□□□□ -0.49
Pfn1P62962 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.96□□□□□ -0.49
Pfn1P62962 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.96□□□□□ -0.49
Pfn1P62962 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.96□□□□□ -0.49
Pfn1P62962 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pfn1P62962 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pfn1P62962 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pfn1P62962 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pfn1P62962 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pfn1P62962 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pfn1P62962 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pfn1P62962 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pfn1P62962 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.96□□□□□ -0.5
Pfn1P62962 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pfn1P62962 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pfn1P62962 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pfn1P62962 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Gm44450-201ENSMUST00000199528 114 ntBASIC11.95□□□□□ -0.5
Pfn1P62962 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.95□□□□□ -0.5
Pfn1P62962 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pfn1P62962 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Pfn1P62962 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.95□□□□□ -0.5
Pfn1P62962 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.95□□□□□ -0.5
Pfn1P62962 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pfn1P62962 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.95□□□□□ -0.5
Pfn1P62962 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pfn1P62962 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pfn1P62962 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.94□□□□□ -0.5
Pfn1P62962 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Pfn1P62962 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pfn1P62962 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms