Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.86□□□□□ -0.35
Lsm5P62322 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.86□□□□□ -0.35
Lsm5P62322 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lsm5P62322 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lsm5P62322 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lsm5P62322 Gm10698-201ENSMUST00000182663 604 ntBASIC12.86□□□□□ -0.35
Lsm5P62322 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.86□□□□□ -0.35
Lsm5P62322 Gm29707-201ENSMUST00000196325 491 ntBASIC12.86□□□□□ -0.35
Lsm5P62322 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.86□□□□□ -0.35
Lsm5P62322 Timm23-208ENSMUST00000226683 750 ntBASIC12.86□□□□□ -0.35
Lsm5P62322 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lsm5P62322 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Lsm5P62322 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lsm5P62322 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lsm5P62322 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.85□□□□□ -0.35
Lsm5P62322 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.85□□□□□ -0.35
Lsm5P62322 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.85□□□□□ -0.35
Lsm5P62322 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.85□□□□□ -0.35
Lsm5P62322 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.85□□□□□ -0.35
Lsm5P62322 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.85□□□□□ -0.35
Lsm5P62322 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lsm5P62322 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lsm5P62322 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.85□□□□□ -0.35
Lsm5P62322 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm5P62322 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lsm5P62322 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.84□□□□□ -0.35
Lsm5P62322 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.84□□□□□ -0.35
Lsm5P62322 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Gm11336-201ENSMUST00000118168 334 ntBASIC12.84□□□□□ -0.35
Lsm5P62322 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.84□□□□□ -0.35
Lsm5P62322 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lsm5P62322 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.84□□□□□ -0.35
Lsm5P62322 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.84□□□□□ -0.35
Lsm5P62322 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms