Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Vbp1P61759 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Gm10849-201ENSMUST00000100397 618 ntBASIC14□□□□□ -0.17
Vbp1P61759 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
Vbp1P61759 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14□□□□□ -0.17
Vbp1P61759 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vbp1P61759 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Vbp1P61759 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vbp1P61759 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Vbp1P61759 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Vbp1P61759 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Vbp1P61759 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vbp1P61759 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.99□□□□□ -0.17
Vbp1P61759 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.99□□□□□ -0.17
Vbp1P61759 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.99□□□□□ -0.17
Vbp1P61759 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.99□□□□□ -0.17
Vbp1P61759 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vbp1P61759 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vbp1P61759 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
Vbp1P61759 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.99□□□□□ -0.17
Vbp1P61759 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Vbp1P61759 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.99□□□□□ -0.17
Vbp1P61759 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Vbp1P61759 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vbp1P61759 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vbp1P61759 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Vbp1P61759 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Vbp1P61759 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.98□□□□□ -0.17
Vbp1P61759 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.98□□□□□ -0.17
Vbp1P61759 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vbp1P61759 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vbp1P61759 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.98□□□□□ -0.17
Vbp1P61759 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.98□□□□□ -0.17
Vbp1P61759 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.98□□□□□ -0.17
Vbp1P61759 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.98□□□□□ -0.17
Vbp1P61759 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vbp1P61759 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vbp1P61759 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Vbp1P61759 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vbp1P61759 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.97□□□□□ -0.17
Vbp1P61759 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms