Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.58□□□□□ -0.24
Sec61a1P61620 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.58□□□□□ -0.24
Sec61a1P61620 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.58□□□□□ -0.24
Sec61a1P61620 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.58□□□□□ -0.24
Sec61a1P61620 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.58□□□□□ -0.24
Sec61a1P61620 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.58□□□□□ -0.24
Sec61a1P61620 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Sec61a1P61620 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
Sec61a1P61620 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Sec61a1P61620 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61a1P61620 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.57□□□□□ -0.24
Sec61a1P61620 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Sec61a1P61620 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sec61a1P61620 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.57□□□□□ -0.24
Sec61a1P61620 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.57□□□□□ -0.24
Sec61a1P61620 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Sec61a1P61620 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.57□□□□□ -0.24
Sec61a1P61620 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.57□□□□□ -0.24
Sec61a1P61620 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Sec61a1P61620 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.57□□□□□ -0.24
Sec61a1P61620 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.57□□□□□ -0.24
Sec61a1P61620 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.57□□□□□ -0.24
Sec61a1P61620 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sec61a1P61620 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.56□□□□□ -0.24
Sec61a1P61620 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.56□□□□□ -0.24
Sec61a1P61620 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.56□□□□□ -0.24
Sec61a1P61620 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Sec61a1P61620 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.56□□□□□ -0.24
Sec61a1P61620 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms