Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Il3ra-202ENSMUST00000223589 738 ntBASIC11□□□□□ -0.65
Cks1bP61025 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cks1bP61025 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cks1bP61025 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11□□□□□ -0.65
Cks1bP61025 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11□□□□□ -0.65
Cks1bP61025 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cks1bP61025 Gm45203-201ENSMUST00000206384 1831 ntBASIC11□□□□□ -0.65
Cks1bP61025 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cks1bP61025 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11□□□□□ -0.65
Cks1bP61025 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cks1bP61025 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC10.99□□□□□ -0.65
Cks1bP61025 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Cks1bP61025 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.99□□□□□ -0.65
Cks1bP61025 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC10.99□□□□□ -0.65
Cks1bP61025 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cks1bP61025 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.99□□□□□ -0.65
Cks1bP61025 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1bP61025 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.98□□□□□ -0.65
Cks1bP61025 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC10.98□□□□□ -0.65
Cks1bP61025 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cks1bP61025 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cks1bP61025 Gm38027-201ENSMUST00000192315 235 ntBASIC10.98□□□□□ -0.65
Cks1bP61025 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.98□□□□□ -0.65
Cks1bP61025 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.98□□□□□ -0.65
Cks1bP61025 AC164629.5-201ENSMUST00000220387 632 ntBASIC10.98□□□□□ -0.65
Cks1bP61025 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cks1bP61025 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cks1bP61025 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cks1bP61025 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1bP61025 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Cks1bP61025 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1bP61025 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cks1bP61025 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1bP61025 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1bP61025 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1bP61025 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms