Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC19.26■□□□□ 0.67
Vps33bP59016 Gm46209-201ENSMUST00000217912 553 ntBASIC19.26■□□□□ 0.67
Vps33bP59016 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.26■□□□□ 0.67
Vps33bP59016 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.26■□□□□ 0.67
Vps33bP59016 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.26■□□□□ 0.67
Vps33bP59016 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.26■□□□□ 0.67
Vps33bP59016 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Vps33bP59016 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.25■□□□□ 0.67
Vps33bP59016 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 Gm12091-201ENSMUST00000146791 830 ntBASIC19.25■□□□□ 0.67
Vps33bP59016 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.25■□□□□ 0.67
Vps33bP59016 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.25■□□□□ 0.67
Vps33bP59016 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.25■□□□□ 0.67
Vps33bP59016 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps33bP59016 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.25■□□□□ 0.67
Vps33bP59016 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Vps33bP59016 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.24■□□□□ 0.67
Vps33bP59016 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.24■□□□□ 0.67
Vps33bP59016 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Vps33bP59016 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 Gm8602-201ENSMUST00000184045 607 ntBASIC19.24■□□□□ 0.67
Vps33bP59016 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.24■□□□□ 0.67
Vps33bP59016 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Vps33bP59016 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.24■□□□□ 0.67
Vps33bP59016 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.24■□□□□ 0.67
Vps33bP59016 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.24■□□□□ 0.67
Vps33bP59016 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps33bP59016 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Vps33bP59016 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Vps33bP59016 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Vps33bP59016 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps33bP59016 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33bP59016 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.22■□□□□ 0.67
Vps33bP59016 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Vps33bP59016 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33bP59016 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19.22■□□□□ 0.67
Vps33bP59016 Gm45059-201ENSMUST00000205558 1077 ntBASIC19.22■□□□□ 0.67
Vps33bP59016 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC19.22■□□□□ 0.67
Vps33bP59016 AC153962.4-201ENSMUST00000217878 242 ntBASIC19.22■□□□□ 0.67
Vps33bP59016 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33bP59016 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33bP59016 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33bP59016 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Vps33bP59016 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33bP59016 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Vps33bP59016 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33bP59016 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.22■□□□□ 0.67
Vps33bP59016 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33bP59016 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps33bP59016 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps33bP59016 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vps33bP59016 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps33bP59016 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps33bP59016 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps33bP59016 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps33bP59016 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vps33bP59016 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms