Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Cdh11P55288 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.05□□□□□ -0.16
Cdh11P55288 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cdh11P55288 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdh11P55288 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cdh11P55288 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cdh11P55288 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cdh11P55288 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdh11P55288 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.04□□□□□ -0.16
Cdh11P55288 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cdh11P55288 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.04□□□□□ -0.16
Cdh11P55288 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh11P55288 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh11P55288 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdh11P55288 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh11P55288 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdh11P55288 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdh11P55288 Gm43347-201ENSMUST00000200226 580 ntBASIC14.03□□□□□ -0.16
Cdh11P55288 Gm34391-201ENSMUST00000203706 907 ntBASIC14.03□□□□□ -0.16
Cdh11P55288 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdh11P55288 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdh11P55288 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh11P55288 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cdh11P55288 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh11P55288 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh11P55288 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cdh11P55288 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cdh11P55288 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh11P55288 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh11P55288 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh11P55288 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.02□□□□□ -0.16
Cdh11P55288 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cdh11P55288 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.02□□□□□ -0.17
Cdh11P55288 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdh11P55288 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.02□□□□□ -0.17
Cdh11P55288 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Cdh11P55288 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.02□□□□□ -0.17
Cdh11P55288 Gm44430-201ENSMUST00000203376 995 ntBASIC14.02□□□□□ -0.17
Cdh11P55288 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdh11P55288 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cdh11P55288 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cdh11P55288 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdh11P55288 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh11P55288 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms