Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nub1P54729 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nub1P54729 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nub1P54729 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.54■□□□□ 0.24
Nub1P54729 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nub1P54729 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nub1P54729 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nub1P54729 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Nub1P54729 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nub1P54729 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nub1P54729 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Nub1P54729 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nub1P54729 Gm15173-201ENSMUST00000122049 433 ntBASIC16.54■□□□□ 0.24
Nub1P54729 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.54■□□□□ 0.24
Nub1P54729 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nub1P54729 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nub1P54729 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nub1P54729 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.54■□□□□ 0.24
Nub1P54729 Gm10060-201ENSMUST00000212002 111 ntBASIC16.54■□□□□ 0.24
Nub1P54729 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nub1P54729 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Nub1P54729 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nub1P54729 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nub1P54729 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nub1P54729 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Nub1P54729 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.54■□□□□ 0.24
Nub1P54729 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nub1P54729 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nub1P54729 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.53■□□□□ 0.24
Nub1P54729 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Nub1P54729 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Gm5682-201ENSMUST00000173402 505 ntBASIC16.53■□□□□ 0.24
Nub1P54729 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nub1P54729 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Nub1P54729 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Nub1P54729 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.53■□□□□ 0.24
Nub1P54729 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Nub1P54729 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.53■□□□□ 0.24
Nub1P54729 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Nub1P54729 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.53■□□□□ 0.24
Nub1P54729 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nub1P54729 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nub1P54729 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nub1P54729 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nub1P54729 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nub1P54729 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nub1P54729 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.52■□□□□ 0.24
Nub1P54729 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nub1P54729 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nub1P54729 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nub1P54729 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nub1P54729 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nub1P54729 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nub1P54729 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nub1P54729 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nub1P54729 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.52■□□□□ 0.24
Nub1P54729 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.52■□□□□ 0.24
Nub1P54729 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.52■□□□□ 0.24
Nub1P54729 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nub1P54729 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nub1P54729 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Nub1P54729 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.52■□□□□ 0.24
Nub1P54729 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.52■□□□□ 0.24
Nub1P54729 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Nub1P54729 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Nub1P54729 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nub1P54729 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nub1P54729 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nub1P54729 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nub1P54729 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nub1P54729 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nub1P54729 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nub1P54729 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nub1P54729 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nub1P54729 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.51■□□□□ 0.23
Nub1P54729 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms