Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox1P53783 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox1P53783 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sox1P53783 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox1P53783 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.65■□□□□ 0.1
Sox1P53783 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.65■□□□□ 0.1
Sox1P53783 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox1P53783 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.65■□□□□ 0.1
Sox1P53783 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Gm37917-201ENSMUST00000194711 392 ntBASIC15.65■□□□□ 0.1
Sox1P53783 Gm5035-201ENSMUST00000215581 927 ntBASIC15.65■□□□□ 0.1
Sox1P53783 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sox1P53783 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Sox1P53783 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox1P53783 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.65■□□□□ 0.1
Sox1P53783 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox1P53783 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox1P53783 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sox1P53783 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.64■□□□□ 0.09
Sox1P53783 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.64■□□□□ 0.09
Sox1P53783 Gm15483-201ENSMUST00000120338 456 ntBASIC15.64■□□□□ 0.09
Sox1P53783 Gm15806-201ENSMUST00000120696 955 ntBASIC15.64■□□□□ 0.09
Sox1P53783 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.64■□□□□ 0.09
Sox1P53783 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sox1P53783 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.64■□□□□ 0.09
Sox1P53783 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sox1P53783 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.64■□□□□ 0.09
Sox1P53783 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Sox1P53783 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox1P53783 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.63■□□□□ 0.09
Sox1P53783 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.63■□□□□ 0.09
Sox1P53783 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Sox1P53783 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sox1P53783 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Sox1P53783 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.63■□□□□ 0.09
Sox1P53783 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.63■□□□□ 0.09
Sox1P53783 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Sox1P53783 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.63■□□□□ 0.09
Sox1P53783 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox1P53783 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sox1P53783 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Sox1P53783 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.62■□□□□ 0.09
Sox1P53783 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.62■□□□□ 0.09
Sox1P53783 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.62■□□□□ 0.09
Sox1P53783 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Gm20445-201ENSMUST00000061905 565 ntBASIC15.62■□□□□ 0.09
Sox1P53783 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Sox1P53783 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Sox1P53783 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms