Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GdnfP48540 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GdnfP48540 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
GdnfP48540 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.52□□□□□ -0.25
GdnfP48540 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GdnfP48540 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
GdnfP48540 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
GdnfP48540 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.52□□□□□ -0.25
GdnfP48540 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
GdnfP48540 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GdnfP48540 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GdnfP48540 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
GdnfP48540 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
GdnfP48540 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.51□□□□□ -0.25
GdnfP48540 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
GdnfP48540 Gm36967-201ENSMUST00000193814 266 ntBASIC13.51□□□□□ -0.25
GdnfP48540 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
GdnfP48540 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.51□□□□□ -0.25
GdnfP48540 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.51□□□□□ -0.25
GdnfP48540 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.51□□□□□ -0.25
GdnfP48540 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GdnfP48540 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.51□□□□□ -0.25
GdnfP48540 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
GdnfP48540 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
GdnfP48540 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.5□□□□□ -0.25
GdnfP48540 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.5□□□□□ -0.25
GdnfP48540 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.5□□□□□ -0.25
GdnfP48540 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.5□□□□□ -0.25
GdnfP48540 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.5□□□□□ -0.25
GdnfP48540 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
GdnfP48540 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
GdnfP48540 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.5□□□□□ -0.25
GdnfP48540 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GdnfP48540 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.5□□□□□ -0.25
GdnfP48540 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
GdnfP48540 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
GdnfP48540 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
GdnfP48540 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.49□□□□□ -0.25
GdnfP48540 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.49□□□□□ -0.25
GdnfP48540 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.49□□□□□ -0.25
GdnfP48540 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.49□□□□□ -0.25
GdnfP48540 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GdnfP48540 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms