Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli1P47806 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gli1P47806 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Gli1P47806 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli1P47806 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli1P47806 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Gli1P47806 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Gli1P47806 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.04■□□□□ -0
Gli1P47806 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Gli1P47806 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gli1P47806 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Gli1P47806 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Gli1P47806 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.03■□□□□ -0
Gli1P47806 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.03■□□□□ -0
Gli1P47806 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Gm18206-201ENSMUST00000207027 926 ntBASIC15.03■□□□□ -0
Gli1P47806 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.03■□□□□ -0
Gli1P47806 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.03■□□□□ -0
Gli1P47806 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Gli1P47806 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Gli1P47806 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gli1P47806 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.02■□□□□ -0
Gli1P47806 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gli1P47806 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Gli1P47806 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gli1P47806 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gli1P47806 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Gli1P47806 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.02■□□□□ -0
Gli1P47806 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gli1P47806 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gli1P47806 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Gli1P47806 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Gli1P47806 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.02■□□□□ -0
Gli1P47806 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.02■□□□□ -0
Gli1P47806 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gli1P47806 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gli1P47806 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.02■□□□□ -0
Gli1P47806 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.02■□□□□ -0
Gli1P47806 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.02■□□□□ -0
Gli1P47806 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gli1P47806 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Gli1P47806 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.02□□□□□ -0.01
Gli1P47806 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gli1P47806 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gli1P47806 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.02□□□□□ -0.01
Gli1P47806 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Gli1P47806 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gli1P47806 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gli1P47806 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.02□□□□□ -0.01
Gli1P47806 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Gli1P47806 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Gli1P47806 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Gli1P47806 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Gli1P47806 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.01□□□□□ -0.01
Gli1P47806 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.01□□□□□ -0.01
Gli1P47806 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Gli1P47806 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.01□□□□□ -0.01
Gli1P47806 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gli1P47806 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gli1P47806 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Gli1P47806 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15□□□□□ -0.01
Gli1P47806 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Gli1P47806 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms