Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Gm8396-201ENSMUST00000057361 823 ntBASIC14.55□□□□□ -0.08
Nkx2-6P43688 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.55□□□□□ -0.08
Nkx2-6P43688 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.55□□□□□ -0.08
Nkx2-6P43688 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Gm27301-201ENSMUST00000184012 127 ntBASIC14.54□□□□□ -0.08
Nkx2-6P43688 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.54□□□□□ -0.08
Nkx2-6P43688 Gm17968-201ENSMUST00000194902 784 ntBASIC14.54□□□□□ -0.08
Nkx2-6P43688 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.54□□□□□ -0.08
Nkx2-6P43688 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.54□□□□□ -0.08
Nkx2-6P43688 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-6P43688 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Nkx2-6P43688 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Mir1895-201ENSMUST00000122615 79 ntBASIC14.53□□□□□ -0.08
Nkx2-6P43688 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Nkx2-6P43688 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Gm44492-201ENSMUST00000197012 141 ntBASIC14.53□□□□□ -0.08
Nkx2-6P43688 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx2-6P43688 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-6P43688 Prob1-201ENSMUST00000097619 3021 ntBASIC14.52□□□□□ -0.08
Nkx2-6P43688 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-6P43688 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.52□□□□□ -0.08
Nkx2-6P43688 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-6P43688 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-6P43688 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Gm14722-201ENSMUST00000118943 689 ntBASIC14.52□□□□□ -0.09
Nkx2-6P43688 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.52□□□□□ -0.09
Nkx2-6P43688 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-6P43688 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.52□□□□□ -0.09
Nkx2-6P43688 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.52□□□□□ -0.09
Nkx2-6P43688 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-6P43688 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-6P43688 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms