Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Grk6-207ENSMUST00000225925 2769 ntBASIC17.28■□□□□ 0.36
Sdc2P43407 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sdc2P43407 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sdc2P43407 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.28■□□□□ 0.36
Sdc2P43407 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.28■□□□□ 0.36
Sdc2P43407 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Sdc2P43407 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.27■□□□□ 0.36
Sdc2P43407 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sdc2P43407 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.27■□□□□ 0.36
Sdc2P43407 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Sdc2P43407 Gm27867-201ENSMUST00000184778 125 ntBASIC17.27■□□□□ 0.36
Sdc2P43407 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.27■□□□□ 0.36
Sdc2P43407 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Sdc2P43407 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sdc2P43407 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sdc2P43407 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc2P43407 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc2P43407 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc2P43407 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc2P43407 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc2P43407 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc2P43407 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc2P43407 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc2P43407 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.26■□□□□ 0.35
Sdc2P43407 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.26■□□□□ 0.35
Sdc2P43407 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Sdc2P43407 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.26■□□□□ 0.35
Sdc2P43407 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.26■□□□□ 0.35
Sdc2P43407 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Sdc2P43407 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.26■□□□□ 0.35
Sdc2P43407 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sdc2P43407 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc2P43407 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sdc2P43407 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Sdc2P43407 Gm7284-201ENSMUST00000131667 944 ntBASIC17.25■□□□□ 0.35
Sdc2P43407 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.25■□□□□ 0.35
Sdc2P43407 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.25■□□□□ 0.35
Sdc2P43407 Gm19164-201ENSMUST00000210667 640 ntBASIC17.25■□□□□ 0.35
Sdc2P43407 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Sdc2P43407 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.25■□□□□ 0.35
Sdc2P43407 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sdc2P43407 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc2P43407 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc2P43407 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc2P43407 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms