Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Gm13223-201ENSMUST00000118609 747 ntBASIC14.57□□□□□ -0.08
Cdx2P43241 Gm12151-201ENSMUST00000121374 290 ntBASIC14.57□□□□□ -0.08
Cdx2P43241 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.57□□□□□ -0.08
Cdx2P43241 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdx2P43241 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdx2P43241 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdx2P43241 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdx2P43241 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdx2P43241 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdx2P43241 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx2P43241 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdx2P43241 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cdx2P43241 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdx2P43241 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Gm6415-201ENSMUST00000118488 348 ntBASIC14.56□□□□□ -0.08
Cdx2P43241 Gm11543-201ENSMUST00000120758 370 ntBASIC14.56□□□□□ -0.08
Cdx2P43241 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Cdx2P43241 Gm23547-201ENSMUST00000158210 271 ntBASIC14.56□□□□□ -0.08
Cdx2P43241 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Gm27437-201ENSMUST00000183429 107 ntBASIC14.56□□□□□ -0.08
Cdx2P43241 Gm27618-201ENSMUST00000183671 60 ntBASIC14.56□□□□□ -0.08
Cdx2P43241 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdx2P43241 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cdx2P43241 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Cdx2P43241 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx2P43241 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Cdx2P43241 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdx2P43241 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Cdx2P43241 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdx2P43241 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cdx2P43241 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdx2P43241 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdx2P43241 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdx2P43241 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cdx2P43241 Gm2810-201ENSMUST00000118681 990 ntBASIC14.55□□□□□ -0.08
Cdx2P43241 Gm15693-201ENSMUST00000120470 637 ntBASIC14.55□□□□□ -0.08
Cdx2P43241 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.55□□□□□ -0.08
Cdx2P43241 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdx2P43241 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cdx2P43241 Gm17837-201ENSMUST00000186435 985 ntBASIC14.55□□□□□ -0.08
Cdx2P43241 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.55□□□□□ -0.08
Cdx2P43241 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.55□□□□□ -0.08
Cdx2P43241 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cdx2P43241 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdx2P43241 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.55□□□□□ -0.08
Cdx2P43241 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdx2P43241 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx2P43241 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdx2P43241 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.54□□□□□ -0.08
Cdx2P43241 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.54□□□□□ -0.08
Cdx2P43241 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Cdx2P43241 Gm16026-204ENSMUST00000162652 683 ntBASIC14.54□□□□□ -0.08
Cdx2P43241 Gm18737-201ENSMUST00000173594 937 ntBASIC14.54□□□□□ -0.08
Cdx2P43241 Gm5866-201ENSMUST00000177881 973 ntBASIC14.54□□□□□ -0.08
Cdx2P43241 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 Gm38294-201ENSMUST00000192831 381 ntBASIC14.54□□□□□ -0.08
Cdx2P43241 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms