Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.12■□□□□ 0.17
Gdf6P43028 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.12■□□□□ 0.17
Gdf6P43028 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Gm45612-201ENSMUST00000211320 160 ntBASIC16.12■□□□□ 0.17
Gdf6P43028 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gdf6P43028 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.12■□□□□ 0.17
Gdf6P43028 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gdf6P43028 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Gdf6P43028 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gdf6P43028 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.11■□□□□ 0.17
Gdf6P43028 Mir1895-201ENSMUST00000122615 79 ntBASIC16.11■□□□□ 0.17
Gdf6P43028 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.11■□□□□ 0.17
Gdf6P43028 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.11■□□□□ 0.17
Gdf6P43028 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gdf6P43028 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.11■□□□□ 0.17
Gdf6P43028 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.11■□□□□ 0.17
Gdf6P43028 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.11■□□□□ 0.17
Gdf6P43028 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gdf6P43028 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gdf6P43028 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.1■□□□□ 0.17
Gdf6P43028 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Gdf6P43028 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Gdf6P43028 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.1■□□□□ 0.17
Gdf6P43028 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.1■□□□□ 0.17
Gdf6P43028 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Gdf6P43028 Gm11025-201ENSMUST00000140773 466 ntBASIC16.1■□□□□ 0.17
Gdf6P43028 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gdf6P43028 Rpph1-201ENSMUST00000175096 319 ntBASIC16.1■□□□□ 0.17
Gdf6P43028 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.1■□□□□ 0.17
Gdf6P43028 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.1■□□□□ 0.17
Gdf6P43028 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Gdf6P43028 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.1■□□□□ 0.17
Gdf6P43028 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gdf6P43028 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Gdf6P43028 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Gdf6P43028 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 Gm13365-201ENSMUST00000121188 973 ntBASIC16.09■□□□□ 0.17
Gdf6P43028 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.09■□□□□ 0.17
Gdf6P43028 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.09■□□□□ 0.17
Gdf6P43028 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.09■□□□□ 0.17
Gdf6P43028 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.09■□□□□ 0.17
Gdf6P43028 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.09■□□□□ 0.17
Gdf6P43028 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gdf6P43028 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gdf6P43028 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gdf6P43028 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gdf6P43028 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gdf6P43028 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gdf6P43028 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gdf6P43028 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gdf6P43028 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms