Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HttP42859 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.2■□□□□ 0.18
HttP42859 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.2■□□□□ 0.18
HttP42859 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HttP42859 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HttP42859 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HttP42859 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.2■□□□□ 0.18
HttP42859 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HttP42859 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.2■□□□□ 0.18
HttP42859 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HttP42859 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.2■□□□□ 0.18
HttP42859 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
HttP42859 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HttP42859 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HttP42859 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.2■□□□□ 0.18
HttP42859 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Gm14660-201ENSMUST00000119809 575 ntBASIC16.19■□□□□ 0.18
HttP42859 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Gm6244-201ENSMUST00000178732 841 ntBASIC16.19■□□□□ 0.18
HttP42859 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.19■□□□□ 0.18
HttP42859 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.19■□□□□ 0.18
HttP42859 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HttP42859 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.19■□□□□ 0.18
HttP42859 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.19■□□□□ 0.18
HttP42859 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.19■□□□□ 0.18
HttP42859 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HttP42859 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
HttP42859 Gm16476-201ENSMUST00000221544 139 ntBASIC16.19■□□□□ 0.18
HttP42859 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.19■□□□□ 0.18
HttP42859 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HttP42859 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
HttP42859 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HttP42859 Gm27892-201ENSMUST00000185017 106 ntBASIC16.19■□□□□ 0.18
HttP42859 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HttP42859 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.18■□□□□ 0.18
HttP42859 Gm15236-201ENSMUST00000117309 379 ntBASIC16.18■□□□□ 0.18
HttP42859 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.18■□□□□ 0.18
HttP42859 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.18■□□□□ 0.18
HttP42859 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.18■□□□□ 0.18
HttP42859 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HttP42859 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.18■□□□□ 0.18
HttP42859 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.18■□□□□ 0.18
HttP42859 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HttP42859 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.18■□□□□ 0.18
HttP42859 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.17■□□□□ 0.18
HttP42859 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HttP42859 Gm12176-201ENSMUST00000121420 875 ntBASIC16.17■□□□□ 0.18
HttP42859 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.17■□□□□ 0.18
HttP42859 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16.17■□□□□ 0.18
HttP42859 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Gm23931-201ENSMUST00000103842 109 ntBASIC16.17■□□□□ 0.18
HttP42859 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Gm12390-201ENSMUST00000117897 397 ntBASIC16.17■□□□□ 0.18
HttP42859 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Gm45784-201ENSMUST00000188360 142 ntBASIC16.17■□□□□ 0.18
HttP42859 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.17■□□□□ 0.18
HttP42859 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.17■□□□□ 0.18
HttP42859 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HttP42859 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms