Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.09□□□□□ -0.15
Nkx2-2P42586 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.09□□□□□ -0.15
Nkx2-2P42586 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.09□□□□□ -0.15
Nkx2-2P42586 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.09□□□□□ -0.15
Nkx2-2P42586 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.09□□□□□ -0.15
Nkx2-2P42586 Gm9682-201ENSMUST00000197505 556 ntBASIC14.09□□□□□ -0.15
Nkx2-2P42586 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.09□□□□□ -0.15
Nkx2-2P42586 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nkx2-2P42586 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nkx2-2P42586 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-2P42586 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-2P42586 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Nkx2-2P42586 AV026068-213ENSMUST00000223675 1171 ntBASIC14.08□□□□□ -0.16
Nkx2-2P42586 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-2P42586 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx2-2P42586 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.07□□□□□ -0.16
Nkx2-2P42586 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-2P42586 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-2P42586 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-2P42586 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Nkx2-2P42586 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-2P42586 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nkx2-2P42586 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-2P42586 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-2P42586 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nkx2-2P42586 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-2P42586 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms