Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.79□□□□□ -0.36
Abca1P41233 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Abca1P41233 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.79□□□□□ -0.36
Abca1P41233 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Abca1P41233 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Abca1P41233 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Abca1P41233 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Abca1P41233 Mir6404-201ENSMUST00000183699 94 ntBASIC12.79□□□□□ -0.36
Abca1P41233 Gm27300-201ENSMUST00000184085 97 ntBASIC12.79□□□□□ -0.36
Abca1P41233 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.79□□□□□ -0.36
Abca1P41233 Gm27335-201ENSMUST00000184758 97 ntBASIC12.79□□□□□ -0.36
Abca1P41233 Gm44492-201ENSMUST00000197012 141 ntBASIC12.79□□□□□ -0.36
Abca1P41233 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Abca1P41233 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Abca1P41233 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abca1P41233 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.78□□□□□ -0.36
Abca1P41233 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Abca1P41233 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Abca1P41233 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Abca1P41233 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.78□□□□□ -0.36
Abca1P41233 Gm45167-201ENSMUST00000208007 322 ntBASIC12.78□□□□□ -0.36
Abca1P41233 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.78□□□□□ -0.36
Abca1P41233 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.78□□□□□ -0.36
Abca1P41233 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.78□□□□□ -0.36
Abca1P41233 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Abca1P41233 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Abca1P41233 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abca1P41233 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Abca1P41233 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Abca1P41233 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Abca1P41233 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Abca1P41233 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Abca1P41233 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Abca1P41233 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.77□□□□□ -0.36
Abca1P41233 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Abca1P41233 Gm37153-201ENSMUST00000193637 231 ntBASIC12.77□□□□□ -0.36
Abca1P41233 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Abca1P41233 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Abca1P41233 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Abca1P41233 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Abca1P41233 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Abca1P41233 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.77□□□□□ -0.37
Abca1P41233 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.77□□□□□ -0.37
Abca1P41233 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm13597-201ENSMUST00000121239 375 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms