Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VhlP40338 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VhlP40338 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VhlP40338 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VhlP40338 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VhlP40338 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VhlP40338 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VhlP40338 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
VhlP40338 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.64□□□□□ -0.39
VhlP40338 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VhlP40338 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VhlP40338 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
VhlP40338 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.63□□□□□ -0.39
VhlP40338 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 Gm14722-201ENSMUST00000118943 689 ntBASIC12.63□□□□□ -0.39
VhlP40338 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.63□□□□□ -0.39
VhlP40338 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.63□□□□□ -0.39
VhlP40338 Gm43799-201ENSMUST00000201845 579 ntBASIC12.63□□□□□ -0.39
VhlP40338 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.63□□□□□ -0.39
VhlP40338 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.63□□□□□ -0.39
VhlP40338 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
VhlP40338 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
VhlP40338 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.63□□□□□ -0.39
VhlP40338 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
VhlP40338 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
VhlP40338 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VhlP40338 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.62□□□□□ -0.39
VhlP40338 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.62□□□□□ -0.39
VhlP40338 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
VhlP40338 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.62□□□□□ -0.39
VhlP40338 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VhlP40338 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
VhlP40338 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.62□□□□□ -0.39
VhlP40338 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VhlP40338 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.62□□□□□ -0.39
VhlP40338 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
VhlP40338 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VhlP40338 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
VhlP40338 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VhlP40338 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VhlP40338 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
VhlP40338 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VhlP40338 Gm7889-201ENSMUST00000185591 958 ntBASIC12.61□□□□□ -0.39
VhlP40338 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.61□□□□□ -0.39
VhlP40338 Gm7977-201ENSMUST00000193787 748 ntBASIC12.61□□□□□ -0.39
VhlP40338 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VhlP40338 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms