Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm6745-201ENSMUST00000199216 526 ntBASIC15.79■□□□□ 0.12
Cxcl12P40224 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cxcl12P40224 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.79■□□□□ 0.12
Cxcl12P40224 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Cxcl12P40224 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cxcl12P40224 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Cxcl12P40224 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.78■□□□□ 0.12
Cxcl12P40224 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.78■□□□□ 0.12
Cxcl12P40224 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Cxcl12P40224 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.78■□□□□ 0.12
Cxcl12P40224 Gm27533-201ENSMUST00000183800 152 ntBASIC15.78■□□□□ 0.12
Cxcl12P40224 Gm45384-201ENSMUST00000210451 277 ntBASIC15.78■□□□□ 0.12
Cxcl12P40224 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.78■□□□□ 0.12
Cxcl12P40224 Gm6218-201ENSMUST00000219812 628 ntBASIC15.78■□□□□ 0.12
Cxcl12P40224 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.78■□□□□ 0.12
Cxcl12P40224 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.78■□□□□ 0.12
Cxcl12P40224 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.78■□□□□ 0.12
Cxcl12P40224 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cxcl12P40224 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cxcl12P40224 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cxcl12P40224 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Cxcl12P40224 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Cxcl12P40224 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
Cxcl12P40224 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cxcl12P40224 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.12
Cxcl12P40224 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 Gm27920-201ENSMUST00000183953 96 ntBASIC15.77■□□□□ 0.12
Cxcl12P40224 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cxcl12P40224 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.77■□□□□ 0.12
Cxcl12P40224 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.77■□□□□ 0.12
Cxcl12P40224 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.77■□□□□ 0.11
Cxcl12P40224 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cxcl12P40224 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cxcl12P40224 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Cxcl12P40224 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cxcl12P40224 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.76■□□□□ 0.11
Cxcl12P40224 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cxcl12P40224 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.76■□□□□ 0.11
Cxcl12P40224 Gm15321-201ENSMUST00000121290 288 ntBASIC15.76■□□□□ 0.11
Cxcl12P40224 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.76■□□□□ 0.11
Cxcl12P40224 Gm23984-201ENSMUST00000157139 203 ntBASIC15.76■□□□□ 0.11
Cxcl12P40224 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.76■□□□□ 0.11
Cxcl12P40224 Gm8515-201ENSMUST00000194852 576 ntBASIC15.76■□□□□ 0.11
Cxcl12P40224 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cxcl12P40224 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.76■□□□□ 0.11
Cxcl12P40224 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cxcl12P40224 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cxcl12P40224 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Cxcl12P40224 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms