Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Foxa1P35582 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
Foxa1P35582 Gm37153-201ENSMUST00000193637 231 ntBASIC14.22□□□□□ -0.13
Foxa1P35582 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Foxa1P35582 AV026068-213ENSMUST00000223675 1171 ntBASIC14.22□□□□□ -0.13
Foxa1P35582 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Foxa1P35582 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Foxa1P35582 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.21□□□□□ -0.13
Foxa1P35582 Sybu-209ENSMUST00000228639 4113 ntBASIC14.21□□□□□ -0.13
Foxa1P35582 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.21□□□□□ -0.13
Foxa1P35582 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.21□□□□□ -0.13
Foxa1P35582 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.21□□□□□ -0.13
Foxa1P35582 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 Gm8318-201ENSMUST00000182954 872 ntBASIC14.21□□□□□ -0.13
Foxa1P35582 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.21□□□□□ -0.13
Foxa1P35582 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.21□□□□□ -0.13
Foxa1P35582 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.21□□□□□ -0.13
Foxa1P35582 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Foxa1P35582 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
Foxa1P35582 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Foxa1P35582 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Foxa1P35582 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Foxa1P35582 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.21□□□□□ -0.14
Foxa1P35582 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Foxa1P35582 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Foxa1P35582 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Foxa1P35582 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Foxa1P35582 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Foxa1P35582 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Foxa1P35582 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.19□□□□□ -0.14
Foxa1P35582 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.19□□□□□ -0.14
Foxa1P35582 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.19□□□□□ -0.14
Foxa1P35582 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Gm2651-201ENSMUST00000203560 838 ntBASIC14.19□□□□□ -0.14
Foxa1P35582 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.19□□□□□ -0.14
Foxa1P35582 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Foxa1P35582 Gm15590-201ENSMUST00000078419 552 ntBASIC14.19□□□□□ -0.14
Foxa1P35582 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms